Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941506.1_cds_XP_016485318.1_76253
CDS Infomation

[gene=LOC107805758] [db_xref=GeneID:107805758] [protein=probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2] [protein_id=XP_016485318.1] [location=complement(join(96064..96684,96826..97710))] [gbkey=CDS]
Sequence

ATGATCGATTACATATTCACTTCAATTCTAGTTTCTCTCGTCTTCGTAATCATGTTGAAA
TATCTATATTCATCAAAAACAAAATTACCACTTCCTCCAGGCCCATTTCCATTGCCATTA
GTCGGGAACCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCCGCTCTTGCAAAGCTAGCG
CAATCACATGGTCGTGATCTCATGTCCATAAGATTCGGCACACGACTCGTGGTTGTTGCT
TCATCCCCTAATGCTGCTTCTGAGGTTCTGAAAACACATGATCGTATGCTTTCTGGCCGT
TTTGTTTCTCATCCCATCCGTGTCAAGGGGTCATTACTTCACAACGTGTCAACTGCTTTT
CTAGAAGAGTGTGACGATAATTGGAAAAGCGTTCGAACCGTATACAGGGGAGCGCTCTTT
TCCACGAAAGCTCTGGAATCTCAGGTAAGTTTGAGGGAGAAGAAAGTCAAGGAAATGATG
CAACATTTGGTTACCAAACAAGGGAAAGTGATTAGTATCAAGGGCGTGGTTTTCGTGACC
GCTTTAAACATATTGGGTAATTTGCTTCTTTCAATAGATTTGATTGACTTTGAAGGCAAG
GGAGTGGGTGAAGAACTGAGGGAGTACCTACGCAAATTTACCGCGGCGGGTGGAATCCTG
GAGTTAGCAGATTTATATCCTATATTGGGTGTTTGCAGTTCGGATGTCCAGGGAACATAT
AAGAAACTTATGGGTTTGTTTGATAAACTTTGTGCTGTTTGGGCAGGCATTATTCAGGAC
AGAAGAAATAAATCAGAGAATCAACCTTCTGCGGATGCTGTAGATTTTATAGATGCTTTG
GTTAAAAATGGTTTCAGCGATAAACATATCAATGCATTGCTTGTGGAAATGTTTGGAGCG
GGTACAGAATCAACAACTGCCACAAGCGAATGGATGCTTGTAGAACTCCTTAGAAATCAA
CAAGCCTTACAAAAACTTCGGCATGAAATCGCGGGAGTAGTAGGAGGTAAGGACTTTGTA
AAAGAATCTGACTTGTCAACCTTACCATACTTGGATGCTTGTTTTAAGGAAACGCTAAGG
TTGCATCCTCCTGGACCGCTGCTACTTCCTCACCGTGCCGTCCAAACATGTGAAGTCATG
GGTTACAGAATTCCTAAAGACACCCAAGTTTTGGTAAATATGTGGGCGATTGCGAGGGAT
CCCAAGATTTGGGACGATGCTTCGAGTTTCAAACCAGAAAGATTTATCAATGCAAAAATA
GACCACAAAGGACGAAATTTTGAGTATATCCCTTTTGGTTCCGGAAGAAGAATATGTGCT
GGAGAACCTCTGGCTTCTAGGTTTATTCCCTTAGCTGTCGCTTCTTTTATCCATAAGTTT
GATTGGATTCTGCCAAATGACATGGACCCTGCTCATATTAGCATGGATGAGATTTTGGAT
ATCACCATGTTTAAGAAAGATCCACTTCTCGTCATTCCCAAATTGCGGAAACGAGGAGAA
GACTGA

Peptide Sequence

PEP ID

XP_016485318.1
PEP Infomation

PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 [Nicotiana tabacum]
Sequence

MIDYIFTSILVSLVFVIMLKYLYSSKTKLPLPPGPFPLPLVGNLFQVGRKRPHAALAKLA
QSHGRDLMSIRFGTRLVVVASSPNAASEVLKTHDRMLSGRFVSHPIRVKGSLLHNVSTAF
LEECDDNWKSVRTVYRGALFSTKALESQVSLREKKVKEMMQHLVTKQGKVISIKGVVFVT
ALNILGNLLLSIDLIDFEGKGVGEELREYLRKFTAAGGILELADLYPILGVCSSDVQGTY
KKLMGLFDKLCAVWAGIIQDRRNKSENQPSADAVDFIDALVKNGFSDKHINALLVEMFGA
GTESTTATSEWMLVELLRNQQALQKLRHEIAGVVGGKDFVKESDLSTLPYLDACFKETLR
LHPPGPLLLPHRAVQTCEVMGYRIPKDTQVLVNMWAIARDPKIWDDASSFKPERFINAKI
DHKGRNFEYIPFGSGRRICAGEPLASRFIPLAVASFIHKFDWILPNDMDPAHISMDEILD
ITMFKKDPLLVIPKLRKRGED

Transcript Sequence

Gene sequence data has not been registered.